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WormBase Tree Display for CDS: PPA21830

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Name Class

PPA21830SMapS_parentSequencePPA_ChrI
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-14.52
DB_remarkcontains similarity to Pfam domain PF01545 (Cation efflux family); contains similarity to Interpro domains IPR002524 (Cation efflux protein), IPR036837 (Cation efflux protein, cytoplasmic domain superfamily), IPR027469 (Cation efflux transmembrane domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111384
Corresponding_transcriptPPA21830.1
Corresponding_proteinPP73344
Corresponding_oligo_set (11)
Matching_cDNAFE934365Inferred_automaticallytranscript_builder.pl
Microarray_results (11)
RNASeq_FPKMWBls:000003226.481From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.77306From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-14.52Curator_confirmedWBPerson4055
Methodcurated