WormBase Tree Display for CDS: PPA21843

PPA21843 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (15)
  DB_info: Database: pristionchus.org cds gene-UMM-S139-21.37
    DB_remark: contains similarity to Pfam domains PF00102 (Protein-tyrosine phosphatase), PF14529 (Endonuclease-reverse transcriptase); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00111397
    Corresponding_transcript: PPA21843.1
    Corresponding_protein: PP53354
    Corresponding_oligo_set: GPL14372_Probes_12921
      GPL14372_Probes_12924
      GPL14372_Probes_34676
      GPL14372_Probes_34677
      GPL14372_Probes_34678
      GPL14372_Probes_9217
      GPL14372_Probes_9218
      GPL14372_Probes_9219
    Microarray_results: GPL14372_Probes_9217
      GPL14372_Probes_9218
      GPL14372_Probes_9219
      GPL14372_Probes_12921
      GPL14372_Probes_12924
      GPL14372_Probes_34676
      GPL14372_Probes_34677
      GPL14372_Probes_34678
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S139-21.37 Curator_confirmed: WBPerson4055
  Method: curated