WormBase Tree Display for CDS: PPA21851
expand all nodes | collapse all nodes | view schema
PPA21851 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-74.28 | ||
DB_remark | contains similarity to Pfam domain PF05649 (Peptidase family M13); contains similarity to Interpro domains IPR042089 (Peptidase M13, domain 2), IPR000718 (Peptidase M13), IPR008753 (Peptidase M13, N-terminal domain), IPR029735 () | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111405 | ||||
Corresponding_transcript | PPA21851.1 | |||||
Corresponding_protein | PP70587 | |||||
Corresponding_oligo_set | GPL14372_Probes_12495 | |||||
GPL14372_Probes_12496 | ||||||
Microarray_results | GPL14372_Probes_12495 | |||||
GPL14372_Probes_12496 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-74.28 | Curator_confirmed | WBPerson4055 | |||
Method | curated |