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WormBase Tree Display for CDS: PPA21903

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Name Class

PPA21903SMapS_parentSequencePPA_ChrX
StructureSource_exons163
121210
13691419
17101748
17911908
30153046
DB_infoDatabasepristionchus.orgcdsgene-UMM-S322-3.16
DB_remarkcontains similarity to Pfam domain PF01060 (Transthyretin-like family); contains similarity to Interpro domains IPR038479 (Transthyretin-like superfamily), IPR001534 (Transthyretin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111457
Corresponding_transcriptPPA21903.1
Corresponding_proteinPP52972
Corresponding_oligo_setGPL14372_Probes_89175
Microarray_resultsGPL14372_Probes_89175
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010160.1175From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S322-3.16Curator_confirmedWBPerson4055
Methodcurated