WormBase Tree Display for CDS: PPA22287
expand all nodes | collapse all nodes | view schema
PPA22287 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 59 | |||
618 | 677 | |||||
906 | 1014 | |||||
1646 | 1775 | |||||
1960 | 2071 | |||||
2162 | 2243 | |||||
2326 | 2447 | |||||
2629 | 2677 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-41.52 | ||
DB_remark | contains similarity to Pfam domain PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx); contains similarity to Interpro domains IPR019424 (Serpentine type 7TM GPCR chemoreceptor Srsx), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111841 | ||||
Corresponding_transcript | PPA22287.1 | |||||
Corresponding_protein | PP65874 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-41.52 | Curator_confirmed | WBPerson4055 | |||
Method | curated |