Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA22351

expand all nodes | collapse all nodes | view schema

Name Class

PPA22351SMapS_parentSequencePPA_ChrII
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-37.22
TREEFAMTREEFAM_IDTF312915
DB_remarkcontains similarity to Pfam domain PF00076 (RNA recognition motif); contains similarity to Interpro domains IPR003954 (RNA recognition motif domain, eukaryote), IPR035979 (RNA-binding domain superfamily), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111905
Corresponding_transcriptPPA22351.1
Corresponding_proteinPP56583
Corresponding_oligo_setGPL14372_Probes_85222
GPL14372_Probes_85223
Matching_cDNAAI988960Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_85222
GPL14372_Probes_85223
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-37.22Curator_confirmedWBPerson4055
Methodcurated