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WormBase Tree Display for CDS: PPA22355

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Name Class

PPA22355SMapS_parentSequencePPA_ChrII
StructureSource_exons (12)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-37.45
DB_remarkcontains similarity to Pfam domains PF00651 (BTB/POZ domain), PF00917 (MATH domain); contains similarity to Interpro domains IPR000210 (BTB/POZ domain), IPR008974 (TRAF-like), IPR002083 (MATH/TRAF domain), IPR011333 (SKP1/BTB/POZ domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00111909
Corresponding_transcriptPPA22355.1
Corresponding_proteinPP53241
Corresponding_oligo_setGPL14372_Probes_29251
GPL14372_Probes_29253
GPL14372_Probes_29254
GPL14372_Probes_29255
Microarray_resultsGPL14372_Probes_29251
GPL14372_Probes_29253
GPL14372_Probes_29254
GPL14372_Probes_29255
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-37.45Curator_confirmedWBPerson4055
Methodcurated