WormBase Tree Display for CDS: PPA22355
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PPA22355 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-37.45 | ||
DB_remark | contains similarity to Pfam domains PF00651 (BTB/POZ domain), PF00917 (MATH domain); contains similarity to Interpro domains IPR000210 (BTB/POZ domain), IPR008974 (TRAF-like), IPR002083 (MATH/TRAF domain), IPR011333 (SKP1/BTB/POZ domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111909 | ||||
Corresponding_transcript | PPA22355.1 | |||||
Corresponding_protein | PP53241 | |||||
Corresponding_oligo_set | GPL14372_Probes_29251 | |||||
GPL14372_Probes_29253 | ||||||
GPL14372_Probes_29254 | ||||||
GPL14372_Probes_29255 | ||||||
Microarray_results | GPL14372_Probes_29251 | |||||
GPL14372_Probes_29253 | ||||||
GPL14372_Probes_29254 | ||||||
GPL14372_Probes_29255 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-37.45 | Curator_confirmed | WBPerson4055 | |||
Method | curated |