WormBase Tree Display for CDS: PPA22390
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PPA22390 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (19) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S41-35.41 | ||
DB_remark | contains similarity to Pfam domain PF02892 (BED zinc finger); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR003656 (Zinc finger, BED-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111944 | ||||
Corresponding_transcript | PPA22390.1 | |||||
Corresponding_protein | PP63043 | |||||
Corresponding_oligo_set | GPL14372_Probes_85262 | |||||
GPL14372_Probes_85263 | ||||||
Microarray_results | GPL14372_Probes_85262 | |||||
GPL14372_Probes_85263 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.55585 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S41-35.41 | Curator_confirmed | WBPerson4055 | |||
Method | curated |