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WormBase Tree Display for CDS: PPA22401

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Name Class

PPA22401SMapS_parentSequencePPA_ChrII
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-34.15
DB_remarkPPA-HCH-1 protein; contains similarity to Pfam domains PF00431 (CUB domain), PF01400 (Astacin (Peptidase family M12A)); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR000859 (CUB domain), IPR035914 (Spermadhesin, CUB domain superfamily), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111955
Corresponding_transcriptPPA22401.1
Corresponding_proteinPP58749
Corresponding_oligo_setGPL14372_Probes_85279
GPL14372_Probes_85280
GPL14372_Probes_85281
Microarray_resultsGPL14372_Probes_85279
GPL14372_Probes_85280
GPL14372_Probes_85281
RNASeq_FPKMWBls:00000322.68985From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001017.94153From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-34.15Curator_confirmedWBPerson4055
Methodcurated