WormBase Tree Display for CDS: PPA22412
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PPA22412 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 114 | |||
248 | 364 | |||||
459 | 532 | |||||
596 | 674 | |||||
743 | 832 | |||||
879 | 957 | |||||
1021 | 1121 | |||||
1169 | 1261 | |||||
1734 | 1856 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S57-10.21 | ||
TREEFAM | TREEFAM_ID | TF324458 | ||||
DB_remark | contains similarity to Pfam domain PF14808 (TMEM164 family); contains similarity to Interpro domain IPR026508 (Transmembrane protein 164) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111966 | ||||
Corresponding_transcript | PPA22412.1 | |||||
Corresponding_protein | PP68899 | |||||
Corresponding_oligo_set | GPL14372_Probes_68650 | |||||
GPL14372_Probes_68651 | ||||||
GPL14372_Probes_68652 | ||||||
Microarray_results | GPL14372_Probes_68650 | |||||
GPL14372_Probes_68651 | ||||||
GPL14372_Probes_68652 | ||||||
RNASeq_FPKM | WBls:0000032 | 9.67826 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S57-10.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |