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WormBase Tree Display for CDS: PPA22520

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Name Class

PPA22520SMapS_parentSequencePPA_ChrI
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-7.38
DB_remarkcontains similarity to Pfam domain PF00497 (Bacterial extracellular solute-binding proteins, family 3); contains similarity to Interpro domains IPR001638 (Solute-binding protein family 3/N-terminal domain of MltF), IPR040128 (Uncharacterized protein T25E4.2-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00112074
Corresponding_transcriptPPA22520.1
Corresponding_proteinPP55351
Corresponding_oligo_setGPL14372_Probes_6906
GPL14372_Probes_6907
GPL14372_Probes_6908
GPL14372_Probes_6909
GPL14372_Probes_6910
Microarray_resultsGPL14372_Probes_6906
GPL14372_Probes_6907
GPL14372_Probes_6908
GPL14372_Probes_6909
GPL14372_Probes_6910
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S196-7.38Curator_confirmedWBPerson4055
Methodcurated