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WormBase Tree Display for CDS: PPA22676

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Name Class

PPA22676SMapS_parentSequencePPA_ChrII
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-91.41
DB_remarkcontains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)), PF12037 (ATPase family AAA domain-containing protein 3, N-terminal); contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR021911 (ATPase family AAA domain-containing protein 3, N-terminal), IPR039188 (ATPase family AAA domain-containing protein 3), IPR003593 (AAA+ ATPase domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00112230
Corresponding_transcriptPPA22676.1
Corresponding_proteinPP58495
Corresponding_oligo_setGPL14372_Probes_64057
GPL14372_Probes_64058
GPL14372_Probes_64059
GPL14372_Probes_64060
Matching_cDNAFE939455Inferred_automaticallytranscript_builder.pl
FG105350Inferred_automaticallytranscript_builder.pl
FG102482Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_64057
GPL14372_Probes_64058
GPL14372_Probes_64059
GPL14372_Probes_64060
RNASeq_FPKMWBls:00000325.70146From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.73347From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-91.41Curator_confirmedWBPerson4055
Methodcurated