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WormBase Tree Display for CDS: PPA22684

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Name Class

PPA22684SMapS_parentSequencePPA_ChrII
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S10-92.65
TREEFAMTREEFAM_IDTF101053
DB_remarkPPA-CDC-14 protein; contains similarity to Pfam domains PF00782 (Dual specificity phosphatase, catalytic domain), PF14671 (Dual specificity protein phosphatase, N-terminal half); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR020422 (Dual specificity protein phosphatase domain), IPR029260 (Dual specificity/tyrosine protein phosphatase, N-terminal), IPR026070 (), IPR029021 (Protein-tyrosine phosphatase-like), IPR000340 (Dual specificity phosphatase, catalytic domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00112238
Corresponding_transcriptPPA22684.1
Corresponding_proteinPP69269
Corresponding_oligo_setGPL14372_Probes_64088
GPL14372_Probes_64089
GPL14372_Probes_64090
GPL14372_Probes_64091
GPL14372_Probes_64092
GPL14372_Probes_64093
GPL14372_Probes_64094
GPL14372_Probes_64095
Matching_cDNAFE937477Inferred_automaticallytranscript_builder.pl
FG096120Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_64088
GPL14372_Probes_64089
GPL14372_Probes_64090
GPL14372_Probes_64091
GPL14372_Probes_64092
GPL14372_Probes_64093
GPL14372_Probes_64094
GPL14372_Probes_64095
RNASeq_FPKMWBls:00000322.11035From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S10-92.65Curator_confirmedWBPerson4055
Methodcurated