WormBase Tree Display for CDS: PPA22733
expand all nodes | collapse all nodes | view schema
PPA22733 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 1 | 32 | |||
144 | 282 | |||||
340 | 476 | |||||
548 | 617 | |||||
663 | 760 | |||||
806 | 937 | |||||
984 | 1051 | |||||
1091 | 1194 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-93.13 | ||
DB_remark | PPA-DPH-5.1 protein; contains similarity to Pfam domain PF05007 (Mannosyltransferase (PIG-M)); contains similarity to Interpro domain IPR007704 (GPI mannosyltransferase 1) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00112287 | ||||
Corresponding_transcript | PPA22733.1 | |||||
Corresponding_protein | PP22231 | |||||
Corresponding_oligo_set | GPL14372_Probes_64296 | |||||
GPL14372_Probes_64297 | ||||||
Matching_cDNA | FG102003 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_64296 | |||||
GPL14372_Probes_64297 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:52:59 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S10-93.13 | Curator_confirmed | WBPerson4055 | |||
[190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | ||||
Method | curated |