WormBase Tree Display for CDS: PPA22741a
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PPA22741a | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
Inferred_automatically | make_isoforms.pl | |||||
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 1 | 86 | |||
553 | 613 | |||||
690 | 758 | |||||
857 | 949 | |||||
1123 | 1235 | |||||
1349 | 1520 | |||||
1608 | 1699 | |||||
1812 | 1897 | |||||
2678 | 2943 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-93.15 | ||
DB_remark | PPA-RGA-9 protein; contains similarity to Pfam domain PF00620 (RhoGAP domain); contains similarity to Interpro domains IPR008936 (Rho GTPase activation protein), IPR000198 (Rho GTPase-activating protein domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00112295 | ||||
Corresponding_transcript | PPA22741a.1 | |||||
Corresponding_protein | PP62347 | |||||
Corresponding_oligo_set | GPL14372_Probes_64320 | |||||
Microarray_results | GPL14372_Probes_64320 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 14 Nov 2019 14:10:25 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S10-93.15 | Curator_confirmed | WBPerson4055 | |||
Method | curated |