WormBase Tree Display for CDS: PPA22741b
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PPA22741b | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (12) | |||||
DB_info | DB_remark | PPA-RGA-9 protein; contains similarity to Pfam domain PF00620 (RhoGAP domain); contains similarity to Interpro domains IPR008936 (Rho GTPase activation protein), IPR000198 (Rho GTPase-activating protein domain) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00112295 | ||||
Corresponding_transcript | PPA22741b.1 | |||||
Corresponding_protein | PP75519 | |||||
Corresponding_oligo_set | GPL14372_Probes_64320 | |||||
Microarray_results | GPL14372_Probes_64320 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 14 Nov 2019 14:10:25 | WBPerson4055 | ||||
Remark | [191114 mh6] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |