WormBase Tree Display for CDS: PPA22745
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PPA22745 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 92 | |||
143 | 277 | |||||
343 | 418 | |||||
481 | 597 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S421-0.0 | ||
DB_remark | contains similarity to Pfam domain PF00375 (Sodium:dicarboxylate symporter family); contains similarity to Interpro domains IPR001991 (Sodium:dicarboxylate symporter), IPR036458 (Sodium:dicarboxylate symporter superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00112299 | ||||
Corresponding_transcript | PPA22745.1 | |||||
Corresponding_protein | PP58210 | |||||
Corresponding_oligo_set | GPL14372_Probes_64339 | |||||
Microarray_results | GPL14372_Probes_64339 | |||||
RNASeq_FPKM | WBls:0000032 | 89.1237 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 87.7875 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S421-0.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |