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WormBase Tree Display for CDS: PPA22775

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Name Class

PPA22775SMapS_parentSequencePPA_ChrII
StructureSource_exons (28)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S421-1.42
DB_remarkcontains similarity to Pfam domain PF03133 (Tubulin-tyrosine ligase family); contains similarity to Interpro domains IPR027749 (Tubulin--tyrosine ligase-like protein 12), IPR013815 (ATP-grasp fold, subdomain 1), IPR004344 (Tubulin-tyrosine ligase/Tubulin polyglutamylase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00112329
Corresponding_transcriptPPA22775.1
Corresponding_proteinPP59738
Corresponding_oligo_setGPL14372_Probes_64469
GPL14372_Probes_64470
GPL14372_Probes_64471
GPL14372_Probes_64472
GPL14372_Probes_64473
GPL14372_Probes_64474
GPL14372_Probes_64475
GPL14372_Probes_64476
GPL14372_Probes_64479
GPL14372_Probes_64480
Microarray_resultsGPL14372_Probes_64469
GPL14372_Probes_64470
GPL14372_Probes_64471
GPL14372_Probes_64472
GPL14372_Probes_64473
GPL14372_Probes_64474
GPL14372_Probes_64475
GPL14372_Probes_64476
GPL14372_Probes_64479
GPL14372_Probes_64480
RNASeq_FPKMWBls:000003216.4099From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.9951From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S421-1.42Curator_confirmedWBPerson4055
Methodcurated