WormBase Tree Display for CDS: PPA22808
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PPA22808 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S421-2.120 | ||
TREEFAM | TREEFAM_ID | TF101035 | ||||
DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00112362 | ||||
Corresponding_transcript | PPA22808.1 | |||||
Corresponding_protein | PP52903 | |||||
Matching_cDNA | BM320687 | Inferred_automatically | transcript_builder.pl | |||
BM812532 | Inferred_automatically | transcript_builder.pl | ||||
BM320128 | Inferred_automatically | transcript_builder.pl | ||||
BM565727 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 299.193 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.1564 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S421-2.120 | Curator_confirmed | WBPerson4055 | |||
Method | curated |