WormBase Tree Display for CDS: PPA22823
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PPA22823 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S421-2.192 | ||
DB_remark | PPA-BEST-3 protein; contains similarity to Pfam domain PF01062 (Bestrophin, RFP-TM, chloride channel); contains similarity to Interpro domains IPR000615 (Bestrophin), IPR021134 (Bestrophin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00112377 | ||||
Corresponding_transcript | PPA22823.1 | |||||
Corresponding_protein | PP59497 | |||||
Corresponding_oligo_set | GPL14372_Probes_64656 | |||||
GPL14372_Probes_64657 | ||||||
GPL14372_Probes_64658 | ||||||
Microarray_results | GPL14372_Probes_64656 | |||||
GPL14372_Probes_64657 | ||||||
GPL14372_Probes_64658 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.17722 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.57136 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S421-2.192 | Curator_confirmed | WBPerson4055 | |||
Method | curated |