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WormBase Tree Display for CDS: PPA23178

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Name Class

PPA23178SMapS_parentSequencePPA_ChrIV
StructureSource_exons1120
820912
12001270
16131676
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-61.8
TREEFAMTREEFAM_IDTF315773
DB_remarkcontains similarity to Pfam domain PF01060 (Transthyretin-like family); contains similarity to Interpro domain IPR001534 (Transthyretin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00112732
Corresponding_transcriptPPA23178.1
Corresponding_proteinPP59684
Corresponding_oligo_setGPL14372_Probes_76184
Matching_cDNAFE932785Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_76184
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010136.8056From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-61.8Curator_confirmedWBPerson4055
Methodcurated