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WormBase Tree Display for CDS: PPA23314

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Name Class

PPA23314SMapS_parentSequencePPA_ChrI
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-8.43
DB_remarkPPA-EGL-10 protein; contains similarity to Pfam domains PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)), PF00615 (Regulator of G protein signaling domain), PF00631 (GGL domain), PF18148 (Regulator of G-protein signalling DHEX domain); contains similarity to Interpro domains IPR036305 (RGS domain superfamily), IPR036284 (G-protein gamma-like domain superfamily), IPR034483 (Regulator of G-protein signalling Egl-10, RGS domain), IPR024066 (RGS, subdomain 1/3), IPR040759 (Regulator of G-protein signalling, DHEX domain), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR016137 (RGS domain), IPR015898 (G-protein gamma-like domain), IPR000591 (DEP domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00112868
Corresponding_transcriptPPA23314.1
Corresponding_proteinPP70810
Corresponding_oligo_setGPL14372_Probes_176
GPL14372_Probes_177
GPL14372_Probes_178
GPL14372_Probes_179
Microarray_resultsGPL14372_Probes_176
GPL14372_Probes_177
GPL14372_Probes_178
GPL14372_Probes_179
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-8.43Curator_confirmedWBPerson4055
Methodcurated