WormBase Tree Display for CDS: PPA23338
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PPA23338 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (49) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S296-6.53 | ||
DB_remark | PPA-IFTA-1 protein; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR017233 (WD repeat protein 35), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00112892 | ||||
Corresponding_transcript | PPA23338.1 | |||||
Corresponding_protein | PP52965 | |||||
RNASeq_FPKM | WBls:0000032 | 1.68944 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S296-6.53 | Curator_confirmed | WBPerson4055 | |||
Method | curated |