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WormBase Tree Display for CDS: PPA23347

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Name Class

PPA23347SMapS_parentSequencePPA_ChrII
StructureSource_exons181
400453
623682
729776
917969
11111159
12061286
15481649
20582120
23952466
DB_infoDatabasepristionchus.orgcdsgene-UMM-S296-6.42
DB_remarkcontains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00112901
Corresponding_transcriptPPA23347.1
Corresponding_proteinPP57963
Corresponding_oligo_setGPL14372_Probes_82567
GPL14372_Probes_82568
Microarray_resultsGPL14372_Probes_82567
GPL14372_Probes_82568
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S296-6.42Curator_confirmedWBPerson4055
Methodcurated