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WormBase Tree Display for CDS: PPA23350

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Name Class

PPA23350SMapS_parentSequencePPA_ChrII
StructureSource_exons180
355427
885956
12451355
15471585
20092113
25282596
DB_infoDatabasepristionchus.orgcdsgene-UMS-S296-6.64
TREEFAMTREEFAM_IDTF319745
DB_remarkcontains similarity to Pfam domain PF00782 (Dual specificity phosphatase, catalytic domain); contains similarity to Interpro domains IPR020422 (Dual specificity protein phosphatase domain), IPR042165 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1), IPR029021 (Protein-tyrosine phosphatase-like), IPR000340 (Dual specificity phosphatase, catalytic domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00112904
Corresponding_transcriptPPA23350.1
Corresponding_proteinPP23736
Corresponding_oligo_setGPL14372_Probes_82578
GPL14372_Probes_82580
GPL14372_Probes_82581
Microarray_resultsGPL14372_Probes_82578
GPL14372_Probes_82580
GPL14372_Probes_82581
RNASeq_FPKMWBls:000003265.2623From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010188.1288From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S296-6.64Curator_confirmedWBPerson4055
Methodcurated