WormBase Tree Display for CDS: PPA23356
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PPA23356 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S296-5.61 | ||
DB_remark | PPA-CHT-2 protein; contains similarity to Pfam domain PF00704 (Glycosyl hydrolases family 18); contains similarity to Interpro domains IPR017853 (Glycoside hydrolase superfamily), IPR001223 (Glycoside hydrolase family 18, catalytic domain), IPR029070 (Chitinase insertion domain superfamily), IPR001002 (Chitin-binding, type 1), IPR011583 (Chitinase II) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00112910 | ||||
Corresponding_transcript | PPA23356.1 | |||||
Corresponding_protein | PP32104 | |||||
Corresponding_oligo_set | GPL14372_Probes_82595 | |||||
GPL14372_Probes_82596 | ||||||
Microarray_results | GPL14372_Probes_82595 | |||||
GPL14372_Probes_82596 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:53:25 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMA-S296-5.61 | Curator_confirmed | WBPerson4055 | |||
[190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | ||||
Method | curated |