Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA23398

expand all nodes | collapse all nodes | view schema

Name Class

PPA23398SMapS_parentSequencePPA_ChrII
StructureSource_exons (50)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S296-3.53
DB_remarkcontains similarity to Pfam domains PF00856 (SET domain), PF03114 (BAR domain); contains similarity to Interpro domains IPR001214 (SET domain), IPR027267 (AH/BAR domain superfamily), IPR004148 (BAR domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00112952
Corresponding_transcriptPPA23398.1
Corresponding_proteinPP65739
Corresponding_oligo_set (13)
Matching_cDNAAW052313Inferred_automaticallytranscript_builder.pl
Microarray_results (13)
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.73905From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S296-3.53Curator_confirmedWBPerson4055
Methodcurated