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WormBase Tree Display for CDS: PPA23558

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Name Class

PPA23558SMapS_parentSequencePPA_ChrX
StructureSource_exons (54)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S344-3.63
DB_remarkcontains similarity to Pfam domains PF00083 (Sugar (and other) transporter), PF07690 (Major Facilitator Superfamily); contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR036423 (Superoxide dismutase-like, copper/zinc binding domain superfamily), IPR036259 (MFS transporter superfamily), IPR005828 (Major facilitator, sugar transporter-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00113112
Corresponding_transcriptPPA23558.1
Corresponding_proteinPP55702
Corresponding_oligo_set (11)
Matching_cDNAEB183667Inferred_automaticallytranscript_builder.pl
Microarray_results (11)
RNASeq_FPKMWBls:00000322.35771From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.39212From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S344-3.63Curator_confirmedWBPerson4055
Methodcurated