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WormBase Tree Display for CDS: PPA23732

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Name Class

PPA23732SMapS_parentSequencePPA_ChrI
StructureSource_exons (85)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-5.6
DB_remarkcontains similarity to Pfam domain PF00443 (Ubiquitin carboxyl-terminal hydrolase); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00113286
Corresponding_transcriptPPA23732.1
Corresponding_proteinPP61028
Corresponding_oligo_set (14)
Microarray_results (14)
RNASeq_FPKMWBls:00000321.52356From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-5.6Curator_confirmedWBPerson4055
Methodcurated