WormBase Tree Display for CDS: PPA23809

PPA23809 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 6 125
      449 581
      677 767
      876 948
      995 1116
      1164 1260
      1329 1463
      1511 1579
      1651 1764
  DB_info: Database: pristionchus.org cds gene-UMM-S57-3.28
      TREEFAM TREEFAM_ID TF105715
    DB_remark: PPA-CSN-6 protein; contains similarity to Pfam domains PF01398 (JAB1/Mov34/MPN/PAD-1 ubiquitin protease), PF13012 (Maintenance of mitochondrial structure and function); contains similarity to Interpro domains IPR000555 (JAB1/MPN/MOV34 metalloenzyme domain), IPR024969 (EIF3F/CSN6-like, C-terminal)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00113363
    Corresponding_transcript: PPA23809.1
    Corresponding_protein: PP74866
    Corresponding_oligo_set: GPL14372_Probes_78581
      GPL14372_Probes_78582
      GPL14372_Probes_78583
      GPL14372_Probes_78584
      GPL14372_Probes_78585
    Matching_cDNA: AI989071 Inferred_automatically: transcript_builder.pl
      FE932122 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_78581
      GPL14372_Probes_78582
      GPL14372_Probes_78583
      GPL14372_Probes_78584
      GPL14372_Probes_78585
    RNASeq_FPKM: WBls:0000032 50.9006 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 50.1027 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 21 Feb 2019 09:53:44 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S57-3.28 Curator_confirmed: WBPerson4055
      [190221 mh6] updated to the latest set provided my MPG Curator_confirmed: WBPerson18244
  Method: curated