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WormBase Tree Display for CDS: PPA23953

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Name Class

PPA23953SMapS_parentSequencePPA_ChrII
StructureSource_exons (13)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-5.38
TREEFAMTREEFAM_IDTF316702
DB_remarkPPA-FRPR-3 protein; contains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like, 7TM), IPR000276 (G protein-coupled receptor, rhodopsin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00113507
Corresponding_transcriptPPA23953.1
Corresponding_proteinPP51791
Corresponding_oligo_setGPL14372_Probes_85365
Microarray_resultsGPL14372_Probes_85365
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S245-5.38Curator_confirmedWBPerson4055
Methodcurated