WormBase Tree Display for CDS: PPA24037
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PPA24037 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S7-75.45 | ||
DB_remark | PPA-PAG-3 protein; contains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type), PF13894 (C2H2-type zinc finger), PF13912 (C2H2-type zinc finger); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00113591 | ||||
Corresponding_transcript | PPA24037.1 | |||||
Corresponding_protein | PP67106 | |||||
Corresponding_oligo_set | GPL14372_Probes_13222 | |||||
GPL14372_Probes_13223 | ||||||
GPL14372_Probes_13224 | ||||||
GPL14372_Probes_34332 | ||||||
Microarray_results | GPL14372_Probes_13222 | |||||
GPL14372_Probes_13223 | ||||||
GPL14372_Probes_13224 | ||||||
GPL14372_Probes_34332 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S7-75.45 | Curator_confirmed | WBPerson4055 | |||
Method | curated |