WormBase Tree Display for CDS: PPA24521
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PPA24521 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 28 | |||
180 | 217 | |||||
279 | 360 | |||||
898 | 971 | |||||
1154 | 1255 | |||||
1431 | 1517 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-16.27 | ||
DB_remark | PPA-SPP-18 protein; contains similarity to Interpro domain IPR011001 (Saposin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00114075 | ||||
Corresponding_transcript | PPA24521.1 | |||||
PPA24521.2 | ||||||
Corresponding_protein | PP64532 | |||||
Corresponding_oligo_set | GPL14372_Probes_51290 | |||||
Matching_cDNA | FE932469 | Inferred_automatically | transcript_builder.pl | |||
EB182723 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_51290 | |||||
RNASeq_FPKM | WBls:0000032 | 127.973 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.7969 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S196-16.27 | Curator_confirmed | WBPerson4055 | |||
Method | curated |