WormBase Tree Display for CDS: PPA24538
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PPA24538 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (14) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-17.12 | ||
DB_remark | PPA-UNC-97 protein; contains similarity to Pfam domain PF00412 (LIM domain); contains similarity to Interpro domains IPR017351 (), IPR001781 (Zinc finger, LIM-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114092 | ||||
Corresponding_transcript | PPA24538.1 | |||||
Corresponding_protein | PP53157 | |||||
Corresponding_oligo_set | GPL14372_Probes_51312 | |||||
GPL14372_Probes_51314 | ||||||
GPL14372_Probes_51316 | ||||||
Microarray_results | GPL14372_Probes_51312 | |||||
GPL14372_Probes_51314 | ||||||
GPL14372_Probes_51316 | ||||||
RNASeq_FPKM | WBls:0000032 | 29.5485 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 34.9011 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S196-17.12 | Curator_confirmed | WBPerson4055 | |||
Method | curated |