WormBase Tree Display for CDS: PPA24915
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PPA24915 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 308 | |||
380 | 485 | |||||
583 | 741 | |||||
1014 | 1154 | |||||
1399 | 1567 | |||||
1969 | 2172 | |||||
2266 | 2346 | |||||
2395 | 2501 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-24.33 | ||
DB_remark | contains similarity to Pfam domain PF10148 (Schwannomin-interacting protein 1); contains similarity to Interpro domains IPR015649 (Schwannomin interacting protein 1, C-terminal), IPR039045 (Schwannomin interacting protein 1) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00114469 | ||||
Corresponding_transcript | PPA24915.1 | |||||
Corresponding_protein | PP24501 | |||||
Corresponding_oligo_set | GPL14372_Probes_37131 | |||||
GPL14372_Probes_37132 | ||||||
GPL14372_Probes_37133 | ||||||
Microarray_results | GPL14372_Probes_37131 | |||||
GPL14372_Probes_37132 | ||||||
GPL14372_Probes_37133 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.02325 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 24.8991 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S196-24.33 | Curator_confirmed | WBPerson4055 | |||
Method | curated |