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WormBase Tree Display for CDS: PPA24937

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Name Class

PPA24937SMapS_parentSequencePPA_ChrI
StructureSource_exons (27)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S196-23.55
TREEFAMTREEFAM_IDTF300620
DB_remarkcontains similarity to Pfam domains PF00069 (Protein kinase domain), PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain), PF12330 (Haspin like kinase domain); contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase domain), IPR011009 (Protein kinase-like domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR037770 (Cyclin-dependent kinase 7), IPR001650 (Helicase, C-terminal domain-like), IPR000719 (Protein kinase domain), IPR014001 (Helicase superfamily 1/2, ATP-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00114491
Corresponding_transcriptPPA24937.1
Corresponding_proteinPP68191
Corresponding_oligo_setGPL14372_Probes_37053
GPL14372_Probes_37054
GPL14372_Probes_37056
GPL14372_Probes_37059
GPL14372_Probes_37060
GPL14372_Probes_37061
GPL14372_Probes_37062
Microarray_resultsGPL14372_Probes_37053
GPL14372_Probes_37054
GPL14372_Probes_37056
GPL14372_Probes_37059
GPL14372_Probes_37060
GPL14372_Probes_37061
GPL14372_Probes_37062
RNASeq_FPKMWBls:00000321.32343From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.68877From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S196-23.55Curator_confirmedWBPerson4055
Methodcurated