WormBase Tree Display for CDS: PPA24947
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PPA24947 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 98 | |||
790 | 886 | |||||
2732 | 2863 | |||||
2968 | 3033 | |||||
3106 | 3384 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-23.25 | ||
DB_remark | contains similarity to Interpro domain IPR018888 (Uncharacterised protein family UPF0561) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114501 | ||||
Corresponding_transcript | PPA24947.1 | |||||
Corresponding_protein | PP51105 | |||||
Corresponding_oligo_set | GPL14372_Probes_51491 | |||||
GPL14372_Probes_51492 | ||||||
GPL14372_Probes_51493 | ||||||
Matching_cDNA | FG096966 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_51491 | |||||
GPL14372_Probes_51492 | ||||||
GPL14372_Probes_51493 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.88027 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 32.5132 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S196-23.25 | Curator_confirmed | WBPerson4055 | |||
Method | curated |