WormBase Tree Display for CDS: PPA24960

PPA24960 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (29)
  DB_info: Database: pristionchus.org cds gene-UMM-S196-22.52
    DB_remark: PPA-LET-413 protein; contains similarity to Pfam domains PF00595 (PDZ domain), PF13855 (Leucine rich repeat); contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR032675 (Leucine-rich repeat domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Start_not_found: 1
  Visible: Gene: WBGene00114514
    Corresponding_transcript: PPA24960.1
    Corresponding_protein: PP68158
    Corresponding_oligo_set: GPL14372_Probes_7208
      GPL14372_Probes_7210
      GPL14372_Probes_7211
      GPL14372_Probes_7212
      GPL14372_Probes_7213
    Microarray_results: GPL14372_Probes_7208
      GPL14372_Probes_7210
      GPL14372_Probes_7211
      GPL14372_Probes_7212
      GPL14372_Probes_7213
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S196-22.52 Curator_confirmed: WBPerson4055
  Method: curated