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WormBase Tree Display for CDS: PPA24961

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Name Class

PPA24961SMapS_parentSequencePPA_ChrI
StructureSource_exons1111
429533
718784
9101007
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-22.39
TREEFAMTREEFAM_IDTF300134
DB_remarkPPA-PFN-3 protein; contains similarity to Pfam domain PF00235 (Profilin); contains similarity to Interpro domains IPR036140 (Profilin superfamily), IPR005455 (Profilin, eukaryotic type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114515
Corresponding_transcriptPPA24961.1
Corresponding_proteinPP66381
Corresponding_oligo_setGPL14372_Probes_51480
GPL14372_Probes_51481
Matching_cDNAFG099573Inferred_automaticallytranscript_builder.pl
FG096432Inferred_automaticallytranscript_builder.pl
FG098485Inferred_automaticallytranscript_builder.pl
AW097622Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_51480
GPL14372_Probes_51481
RNASeq_FPKMWBls:0000032163.771From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.67474From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S196-22.39Curator_confirmedWBPerson4055
Methodcurated