WormBase Tree Display for CDS: PPA24977
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PPA24977 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (20) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-21.69 | ||
TREEFAM | TREEFAM_ID | TF300439 | ||||
DB_remark | PPA-AMPD-1 protein; contains similarity to Pfam domain PF00962 (Adenosine deaminase); contains similarity to Interpro domains IPR001365 (Adenosine deaminase domain), IPR032466 (Metal-dependent hydrolase), IPR006329 (AMP deaminase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00114531 | ||||
Corresponding_transcript | PPA24977.1 | |||||
Corresponding_protein | PP73282 | |||||
Corresponding_oligo_set | GPL14372_Probes_51434 | |||||
GPL14372_Probes_51438 | ||||||
GPL14372_Probes_51439 | ||||||
GPL14372_Probes_51440 | ||||||
Microarray_results | GPL14372_Probes_51434 | |||||
GPL14372_Probes_51438 | ||||||
GPL14372_Probes_51439 | ||||||
GPL14372_Probes_51440 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.69657 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.097 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S196-21.69 | Curator_confirmed | WBPerson4055 | |||
Method | curated |