WormBase Tree Display for CDS: PPA24998
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PPA24998 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S196-21.42 | ||
TREEFAM | TREEFAM_ID | TF314941 | ||||
DB_remark | contains similarity to Pfam domain PF06309 (Torsin); contains similarity to Interpro domains IPR030553 (), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR010448 (Torsin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114552 | ||||
Corresponding_transcript | PPA24998.1 | |||||
Corresponding_protein | PP63638 | |||||
Corresponding_oligo_set | GPL14372_Probes_51381 | |||||
GPL14372_Probes_51382 | ||||||
Microarray_results | GPL14372_Probes_51381 | |||||
GPL14372_Probes_51382 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 22.7501 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S196-21.42 | Curator_confirmed | WBPerson4055 | |||
Method | curated |