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WormBase Tree Display for CDS: PPA24999

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Name Class

PPA24999SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S196-21.18
TREEFAMTREEFAM_IDTF105897
DB_remarkcontains similarity to Pfam domains PF04427 (Brix domain), PF14813 (NADH dehydrogenase 1 beta subcomplex subunit 2); contains similarity to Interpro domains IPR007109 (Brix domain), IPR026627 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114553
Corresponding_transcriptPPA24999.1
Corresponding_proteinPP61304
Corresponding_oligo_setGPL14372_Probes_51372
GPL14372_Probes_51373
GPL14372_Probes_51375
GPL14372_Probes_51378
GPL14372_Probes_51379
GPL14372_Probes_51380
Matching_cDNAFG102528Inferred_automaticallytranscript_builder.pl
FG105468Inferred_automaticallytranscript_builder.pl
FE936373Inferred_automaticallytranscript_builder.pl
FG104463Inferred_automaticallytranscript_builder.pl
FE940648Inferred_automaticallytranscript_builder.pl
FE936766Inferred_automaticallytranscript_builder.pl
FG104337Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_51372
GPL14372_Probes_51373
GPL14372_Probes_51375
GPL14372_Probes_51378
GPL14372_Probes_51379
GPL14372_Probes_51380
RNASeq_FPKMWBls:000003277.4401From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101160.053From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S196-21.18Curator_confirmedWBPerson4055
Methodcurated