WormBase Tree Display for CDS: PPA25061
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PPA25061 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 63 | |||
1454 | 1508 | |||||
1925 | 1999 | |||||
2531 | 2608 | |||||
3075 | 3149 | |||||
3786 | 3916 | |||||
4330 | 4434 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S66-37.32 | ||
DB_remark | contains similarity to Pfam domain PF05093 (Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis); contains similarity to Interpro domain IPR007785 (Anamorsin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114615 | ||||
Corresponding_transcript | PPA25061.1 | |||||
Corresponding_protein | PP72516 | |||||
Matching_cDNA | FG105279 | Inferred_automatically | transcript_builder.pl | |||
FG104761 | Inferred_automatically | transcript_builder.pl | ||||
FE938019 | Inferred_automatically | transcript_builder.pl | ||||
FG103611 | Inferred_automatically | transcript_builder.pl | ||||
FE941017 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 5.54537 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S66-37.32 | Curator_confirmed | WBPerson4055 | |||
Method | curated |