Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA25175

expand all nodes | collapse all nodes | view schema

Name Class

PPA25175SMapS_parentSequencePPA_ChrII
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S498-0.75
TREEFAMTREEFAM_IDTF317559
DB_remarkcontains similarity to Pfam domains PF01390 (SEA domain), PF01826 (Trypsin Inhibitor like cysteine rich domain), PF03351 (DOMON domain); contains similarity to Interpro domains IPR000082 (SEA domain), IPR000742 (EGF-like domain), IPR036364 (SEA domain superfamily), IPR005018 (DOMON domain), IPR002919 (Trypsin Inhibitor-like, cysteine rich domain), IPR036084 (Serine protease inhibitor-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00114729
Corresponding_transcriptPPA25175.1
Corresponding_proteinPP63532
Corresponding_oligo_setGPL14372_Probes_84352
GPL14372_Probes_84353
GPL14372_Probes_84354
Microarray_resultsGPL14372_Probes_84352
GPL14372_Probes_84353
GPL14372_Probes_84354
RNASeq_FPKMWBls:00000320.678169From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.40258From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S498-0.75Curator_confirmedWBPerson4055
Methodcurated