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WormBase Tree Display for CDS: PPA25220

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Name Class

PPA25220SMapS_parentSequencePPA_ChrII
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S387-1.66
DB_remarkcontains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114774
Corresponding_transcriptPPA25220.1
Corresponding_proteinPP56860
Corresponding_oligo_setGPL14372_Probes_28568
GPL14372_Probes_28569
Microarray_resultsGPL14372_Probes_28568
GPL14372_Probes_28569
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S387-1.66Curator_confirmedWBPerson4055
Methodcurated