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WormBase Tree Display for CDS: PPA25236

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Name Class

PPA25236EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons1117
11971316
13631466
15121648
16921799
18431934
DB_infoDatabasepristionchus.orgcdsgene-UMM-S387-2.23
DB_remarkcontains similarity to Pfam domain PF04161 (Arv1-like family); contains similarity to Interpro domain IPR007290 (Arv1 protein)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114790
Corresponding_transcriptPPA25236.1
Corresponding_proteinPP75535
Matching_cDNAFG103359Inferred_automaticallytranscript_builder.pl
CN657864Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Oct 2019 15:55:12WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S387-2.23Curator_confirmedWBPerson4055
[191008 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated