WormBase Tree Display for CDS: PPA25236
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PPA25236 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 1 | 117 | |||
1197 | 1316 | |||||
1363 | 1466 | |||||
1512 | 1648 | |||||
1692 | 1799 | |||||
1843 | 1934 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S387-2.23 | ||
DB_remark | contains similarity to Pfam domain PF04161 (Arv1-like family); contains similarity to Interpro domain IPR007290 (Arv1 protein) | |||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114790 | ||||
Corresponding_transcript | PPA25236.1 | |||||
Corresponding_protein | PP75535 | |||||
Matching_cDNA | FG103359 | Inferred_automatically | transcript_builder.pl | |||
CN657864 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Oct 2019 15:55:12 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S387-2.23 | Curator_confirmed | WBPerson4055 | |||
[191008 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |