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WormBase Tree Display for CDS: PPA25283

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Name Class

PPA25283SMapS_parentSequencePPA_ChrII
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S387-4.84
TREEFAMTREEFAM_IDTF313205
DB_remarkPPA-SFXN-1.4 protein; contains similarity to Pfam domain PF03820 (Sideroflexins); contains similarity to Interpro domain IPR004686 (Tricarboxylate/iron carrier)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114837
Corresponding_transcriptPPA25283.1
Corresponding_proteinPP52562
Matching_cDNAFE934869Inferred_automaticallytranscript_builder.pl
FG102224Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:00000327.59091From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.96528From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S387-4.84Curator_confirmedWBPerson4055
Methodcurated