WormBase Tree Display for CDS: PPA25283
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PPA25283 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S387-4.84 | ||
TREEFAM | TREEFAM_ID | TF313205 | ||||
DB_remark | PPA-SFXN-1.4 protein; contains similarity to Pfam domain PF03820 (Sideroflexins); contains similarity to Interpro domain IPR004686 (Tricarboxylate/iron carrier) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00114837 | ||||
Corresponding_transcript | PPA25283.1 | |||||
Corresponding_protein | PP52562 | |||||
Matching_cDNA | FE934869 | Inferred_automatically | transcript_builder.pl | |||
FG102224 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 7.59091 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.96528 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S387-4.84 | Curator_confirmed | WBPerson4055 | |||
Method | curated |