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WormBase Tree Display for CDS: PPA25315

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Name Class

PPA25315SMapS_parentSequencePPA_ChrII
StructureSource_exons (40)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S387-5.60
DB_remarkcontains similarity to Pfam domain PF01062 (Bestrophin, RFP-TM, chloride channel); contains similarity to Interpro domains IPR000615 (Bestrophin), IPR021134 (Bestrophin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00114869
Corresponding_transcriptPPA25315.1
Corresponding_proteinPP69505
Corresponding_oligo_setGPL14372_Probes_28488
GPL14372_Probes_83804
GPL14372_Probes_83811
GPL14372_Probes_83815
GPL14372_Probes_83816
GPL14372_Probes_83817
GPL14372_Probes_83818
Microarray_resultsGPL14372_Probes_28488
GPL14372_Probes_83804
GPL14372_Probes_83811
GPL14372_Probes_83815
GPL14372_Probes_83816
GPL14372_Probes_83817
GPL14372_Probes_83818
RNASeq_FPKMWBls:00000326.09477From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.4232From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S387-5.60Curator_confirmedWBPerson4055
Methodcurated