WormBase Tree Display for CDS: PPA25661
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PPA25661 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-22.12 | ||
DB_remark | PPA-KETN-1.1 protein; contains similarity to Pfam domain PF07679 (Immunoglobulin I-set domain); contains similarity to Interpro domains IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00115215 | ||||
Corresponding_transcript | PPA25661.1 | |||||
Corresponding_protein | PP66549 | |||||
Corresponding_oligo_set | GPL14372_Probes_18483 | |||||
GPL14372_Probes_18484 | ||||||
GPL14372_Probes_18485 | ||||||
GPL14372_Probes_18486 | ||||||
GPL14372_Probes_18487 | ||||||
Microarray_results | GPL14372_Probes_18483 | |||||
GPL14372_Probes_18484 | ||||||
GPL14372_Probes_18485 | ||||||
GPL14372_Probes_18486 | ||||||
GPL14372_Probes_18487 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-22.12 | Curator_confirmed | WBPerson4055 | |||
Method | curated |