WormBase Tree Display for CDS: PPA25675
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PPA25675 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (50) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-21.19 | ||
DB_remark | contains similarity to Pfam domains PF00135 (Carboxylesterase family), PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR002018 (Carboxylesterase, type B) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00115229 | ||||
Corresponding_transcript | PPA25675.1 | |||||
Corresponding_protein | PP57809 | |||||
Corresponding_oligo_set (15) | ||||||
Microarray_results (15) | ||||||
RNASeq_FPKM | WBls:0000032 | 1.35976 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 17.6634 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-21.19 | Curator_confirmed | WBPerson4055 | |||
Method | curated |